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Howto

What is a Beacon?

A Beacon is an online web service that allows users to query an institution’s databases, to determine whether they contain a genetic variant of interest. The query is structured as a yes/no question of the form: “Do you have any genomes with an ‘X’ at position Y on chromosome Z?”

mbaudis 2018-10-17: more ...

Local Jekyll based website generation

In an ideal scenario, your Github served website could be build locally, with the same output structure and layout.

@mbaudis 2019-03-14: more ...

Website - Header for Web Pages

The YAML headers are necessary to process the Markdown (or HTML) files in the page collections. The Progenetix Jekyll template uses standard Jekyll headers, but also adds some additional parameters.

@mbaudis 2019-03-14: more ...

Website - Directories and Files

The Progenetix Jekyll template modifies the standard Jekyll file structure.

@mbaudis 2019-03-14: more ...

Website - Add and Edit Pages

New pages are added to the website inside one of the “collections” directories in the / directory. This can either be done by adding files locally or on Github (if hosted there).

@mbaudis 2019-03-25: more ...

ProgenetixTemplate::podmd.pl Perl Code Documentation

2019-10-03: more ...

ProgenetixTemplate::bootstrap_site.pl Perl Code Documentation

2019-10-03: more ...